Welcome to xPore’s documentation!

xPore is a Python package for detection of differentail RNA modifications from Nanopore sequencing data.

To install the latest release, run:

pip install xpore
pyensembl install --release 91 --species homo_sapiens  # Please specify the compatible Ensembl release with your data when you install it.

See our Installation page for details.

To detect differential modifications, you can follow the instructions in our Quickstart page.

Contacts

xPore is maintained by Ploy N. Pratanwanich and Jonathan Goeke from the Genome Institute of Singapore, A*STAR.

If you want to contribute, please leave an issue in our repo

Thank you!