Welcome to xPore’s documentation!

xPore is a Python package for identification of differentail RNA modifications from Nanopore sequencing data.

To install the latest release, run:

pip install xpore

See our Installation page for details.

To check the version of xPore, run:

xpore -v

To detect differential modifications, you can follow the instructions in our Quickstart page.


If you use xPore in your research, please cite

Ploy N. Pratanwanich, et al.,Identification of differential RNA modifications from nanopore direct RNA sequencing with xPore. Nat Biotechnol (2021), https://doi.org/10.1038/s41587-021-00949-w

xPore is maintained by Ploy N. Pratanwanich, Yuk Kei Wan and Jonathan Goeke from the Genome Institute of Singapore, A*STAR.

If you want to contribute, please leave an issue in our repo

Thank you!